BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H05LP1|AL429964
(419 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig644 640 0.0
>3x_Contig644
Length = 3211
Score = 640 bits (314), Expect = 0.0
Identities = 385/416 (92%), Gaps = 3/416 (0%)
Strand = Plus / Minus
Query: 4 acgggcaacctataacgtggattacgtcagaagatatcattatwcttcaaaagtcaatat 63
||||||||||| |||||||||| |||||||||| |||| |||| ||||||||||||||||
Sbjct: 1819 acgggcaacct-taacgtggatgacgtcagaag-tatc-ttattcttcaaaagtcaatat 1763
Query: 64 acgwaacaatttaaaatcatagtatttaattatatattactacmaaggaaactkaaaamt 123
||| ||||||| |||||||||||||| |||||||||||||||| ||||||||| |||| |
Sbjct: 1762 acgtaacaattgaaaatcatagtattgaattatatattactaccaaggaaactgaaaact 1703
Query: 124 agacgttaatggtaagctcgtgcgttccattagtcactawtatacctkttatcagttgaa 183
|||||||||||||||||||||||| |||||||||||| ||| ||| |||||||| |||
Sbjct: 1702 ggacgttaatggtaagctcgtgcgtgccattagtcactgttatccctgttatcagtggaa 1643
Query: 184 tcaatatcaaattctataaaacaaacgctttttagcggttaaacagacaaaataatwcca 243
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||
Sbjct: 1642 tcaatatcaaattctatagaacaaacgctttttggcggttaaacagacaaaataattcca 1583
Query: 244 catctwccttttcatcttctcarcwctccactgaaatattaattgmcaatawcattctgc 303
||||| |||||||||||||||| | |||||||||||||||||||| ||||| ||||||||
Sbjct: 1582 catcttccttttcatcttctcagctctccactgaaatattaattgccaatatcattctgc 1523
Query: 304 ttmctraatttgmccatgacaatgaaaaggtattttgcaaaacaacttcacagattgaag 363
|| || |||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 ttcctgaatttgcccttgacaatgaaaaggtattttgcaaaacaacttcacagattgaag 1463
Query: 364 aacagccttcgacatctactgtctawagcgtactacgaaaaaactaaagggccatt 419
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1462 aacagccttcgacatctactgtctatagcgtactacgaaaaaactaaagggccatt 1407
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2593
Number of Sequences: 1807
Number of extensions: 2593
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 419
length of database: 10,358,551
effective HSP length: 15
effective length of query: 404
effective length of database: 10,331,446
effective search space: 4173904184
effective search space used: 4173904184
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.3 bits)